- using R Under development (unstable) (2024-12-18 r87448)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.5 (1)
Debian flang-new version 19.1.5 (1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘MVR/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘MVR’ version ‘1.33.0’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘MVR’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘Debian clang version 19.1.5 (1)’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking whether startup messages can be suppressed ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s/9s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) cluster.diagnostic.Rd:35: Lost braces; missing escapes or markup?
35 | Defaults to 2. (Normally 1 or 2. Degree 0 is also allowed, but see the "Note" in loess {stats} package.)}
| ^
checkRd: (-1) cluster.diagnostic.Rd:36: Lost braces; missing escapes or markup?
36 | \item{family}{Family distribution in {"gaussian", "symmetric"} of the \code{loess()} function (R package \pkg{stats}), used for local fitting .
| ^
checkRd: (-1) mvr.Rd:108: Lost braces
108 | \item membership {\code{numeric} \code{vector} of cluster membership of each variable}
| ^
checkRd: (-1) mvr.Rd:109: Lost braces
109 | \item nc {Positive \code{integer} scalar of number of clusters found in optimal cluster configuration}
| ^
checkRd: (-1) mvr.Rd:110: Lost braces
110 | \item gap {\code{numeric} \code{vector} of the similarity statistic values}
| ^
checkRd: (-1) mvr.Rd:111: Lost braces
111 | \item sde {\code{numeric} \code{vector} of the standard errors of the similarity statistic values}
| ^
checkRd: (-1) mvr.Rd:112-113: Lost braces
112 | \item mu.std {\code{numeric} \code{matrix} (\code{K} x p) of the vector of standardized means by groups (rows),
| ^
checkRd: (-1) mvr.Rd:113: Escaped LaTeX specials: \#
checkRd: (-1) mvr.Rd:114-115: Lost braces
114 | \item sd.std {\code{numeric} \code{matrix} (\code{K} x p) of the vector of standardized standard deviations by groups (rows),
| ^
checkRd: (-1) mvr.Rd:115: Escaped LaTeX specials: \#
checkRd: (-1) mvr.Rd:116: Lost braces
116 | \item mu.quant {\code{numeric} \code{matrix} (\code{nc.max} - \code{nc.min} + 1) x (length(\code{probs})) of quantiles of means}
| ^
checkRd: (-1) mvr.Rd:117: Lost braces
117 | \item sd.quant {\code{numeric} \code{matrix} (\code{nc.max} - \code{nc.min} + 1) x (length(\code{probs})) of quantiles of standard deviations}
| ^
checkRd: (-1) stabilization.diagnostic.Rd:31: Lost braces; missing escapes or markup?
31 | Defaults to 2. (Normally 1 or 2. Degree 0 is also allowed, but see the "Note" in loess {stats} package.)}
| ^
checkRd: (-1) stabilization.diagnostic.Rd:32: Lost braces; missing escapes or markup?
32 | \item{family}{Family distribution in {"gaussian", "symmetric"} of the \code{loess()} function (R package \pkg{stats}), used for local fitting .
| ^
- checking Rd metadata ... OK
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- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... [2s/2s] OK
- checking PDF version of manual ... [6s/8s] OK
- checking HTML version of manual ... [1s/2s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE