• using R Under development (unstable) (2024-12-18 r87448)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 19.1.5 (1)     Debian flang-new version 19.1.5 (1)
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘MLGL/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘MLGL’ version ‘1.0.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘MLGL’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/4s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [19s/25s] OK
• checking Rd files ... [1s/1s] NOTE checkRd: (-1) MLGL.Rd:43: Lost braces; missing escapes or markup?     43 | \item{y}{vector of size n. If loss = "logit", elements of y must be in {-1,1}}        | ^ checkRd: (-1) cv.MLGL.Rd:25: Lost braces; missing escapes or markup?     25 | \item{y}{vector of size n. If loss = "logit", elements of y must be in {-1,1}}        | ^ checkRd: (-1) overlapgglasso.Rd:26: Lost braces; missing escapes or markup?     26 | \item{y}{vector of size n. If loss = "logit", elements of y must be in {-1,1}}        | ^ checkRd: (-1) stability.MLGL.Rd:25: Lost braces; missing escapes or markup?     25 | \item{y}{vector of size n. If loss = "logit", elements of y must be in {-1,1}}        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   MLGL.Rd: gglasso   cv.MLGL.Rd: cv.gglasso, predict.cv.gglasso   overlapgglasso.Rd: gglasso   stability.MLGL.Rd: gglasso Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [10s/12s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [1s/3s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 NOTEs