• using R Under development (unstable) (2024-11-15 r87338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 19.1.3 (2)     Debian flang-new version 19.1.3 (2)
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘EpiReport/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘EpiReport’ version ‘1.0.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘EpiReport’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [10s/14s] OK
• checking Rd files ... [1s/1s] NOTE checkRd: (-1) getAgeGender.Rd:52: Lost braces in \itemize; meant \describe ? checkRd: (-1) getAgeGender.Rd:53: Lost braces in \itemize; meant \describe ? checkRd: (-1) getAgeGender.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) getAgeGender.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) getMap.Rd:44-45: Lost braces in \itemize; meant \describe ? checkRd: (-1) getMap.Rd:46-48: Lost braces in \itemize; meant \describe ? checkRd: (-1) getMap.Rd:49-51: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTableByMS.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTableByMS.Rd:60: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTableByMS.Rd:61-62: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTrend.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTrend.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotAgeGender.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotAgeGender.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotAgeGender.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:44: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTS12MAvg.Rd:27: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTS12MAvg.Rd:28: Lost braces in \itemize; meant \describe ?
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   getAgeGender.Rd: ggplot2, officer   getMap.Rd: officer   getSeason.Rd: ggplot2, officer   getTableByMS.Rd: flextable, officer   getTrend.Rd: ggplot2, officer   plotAge.Rd: ggplot2   plotAgeGender.Rd: ggplot2   plotBar.Rd: ggplot2   plotBarGrouped.Rd: ggplot2   plotBarGroupedH.Rd: ggplot2   plotBarH.Rd: ggplot2   plotPie.Rd: ggplot2   plotSeasonality.Rd: ggplot2   plotTS.Rd: ggplot2   plotTS12MAvg.Rd: ggplot2   plotTSGrouped.Rd: ggplot2   shapeECDCFlexTable.Rd: set_header_df, flextable Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [11s/13s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [30s/39s] OK
• checking PDF version of manual ... [7s/10s] OK
• checking HTML version of manual ... [2s/3s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 NOTEs