* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘COAP’ ... ** package ‘COAP’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.5 (1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpS2RxoO/R.INSTALL35dab172882835/COAP/src' clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c coap_R1.cpp -o coap_R1.o coap_R1.cpp:13:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined] 13 | #define INT_MIN (-INT_MAX - 1) | ^ /usr/lib/llvm-19/lib/clang/19/include/limits.h:55:9: note: previous definition is here 55 | #define INT_MIN (-__INT_MAX__ -1) | ^ coap_R1.cpp:52:7: warning: unused variable 'i' [-Wunused-variable] 52 | int i, n = X_count.n_rows, p = X_count.n_cols, q= B.n_cols; | ^ coap_R1.cpp:53:34: warning: unused variable 'logS' [-Wunused-variable] 53 | double pois_term1, pois_term2, logS, entropy=0.0, ELBO=0.0; | ^~~~ coap_R1.cpp:74:7: warning: unused variable 'n' [-Wunused-variable] 74 | int n = Y.n_rows, d = Z.n_cols; | ^ coap_R1.cpp:104:7: warning: unused variable 'n' [-Wunused-variable] 104 | int n = Y.n_rows, d = Z.n_cols; | ^ coap_R1.cpp:140:7: warning: unused variable 'i' [-Wunused-variable] 140 | int i, j, n = X_count.n_rows, p = X_count.n_cols, q= B.n_cols; | ^ coap_R1.cpp:140:10: warning: unused variable 'j' [-Wunused-variable] 140 | int i, j, n = X_count.n_rows, p = X_count.n_cols, q= B.n_cols; | ^ coap_R1.cpp:140:53: warning: unused variable 'q' [-Wunused-variable] 140 | int i, j, n = X_count.n_rows, p = X_count.n_cols, q= B.n_cols; | ^ coap_R1.cpp:190:7: warning: unused variable 'i' [-Wunused-variable] 190 | int i, n = X_count.n_rows, p = X_count.n_cols, q= B_int.n_cols; | ^ coap_R1.cpp:190:30: warning: unused variable 'p' [-Wunused-variable] 190 | int i, n = X_count.n_rows, p = X_count.n_cols, q= B_int.n_cols; | ^ 10 warnings generated. clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o COAP.so RcppExports.o coap_R1.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpS2RxoO/R.INSTALL35dab172882835/COAP/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpS2RxoO/R.INSTALL35dab172882835/COAP/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpS2RxoO/R.INSTALL35dab172882835/COAP/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-COAP/00new/COAP/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (COAP)