* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘BoolNet’ ...
** package ‘BoolNet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 19.1.6 (1)’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp54j0wk/R.INSTALL3b3d511eb85394/BoolNet/src'
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c attractor_info.c -o attractor_info.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c attractor_search_interface.c -o attractor_search_interface.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c common.c -o common.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c picosat.c -o picosat.o
picosat.c:2287:50: warning: variable 'count_resolved' set but not used [-Wunused-but-set-variable]
 2287 |   unsigned num_true, num_undef, num_false, size, count_resolved;
      |                                                  ^
picosat.c:3263:15: warning: variable 'fmt' set but not used [-Wunused-but-set-variable]
 3263 |   const char *fmt;
      |               ^
picosat.c:3264:17: warning: variable 'e' set but not used [-Wunused-but-set-variable]
 3264 |   unsigned tmp, e;
      |                 ^
picosat.c:3776:10: warning: unused variable 'start' [-Wunused-variable]
 3776 |   double start = picosat_time_stamp ();
      |          ^~~~~
picosat.c:5333:12: warning: variable 'collect' set but not used [-Wunused-but-set-variable]
 5333 |   unsigned collect, delta;
      |            ^
picosat.c:6466:12: warning: variable 'num_non_false' set but not used [-Wunused-but-set-variable]
 6466 |   unsigned num_non_false;
      |            ^
picosat.c:7024:38: warning: variable 'npartial' set but not used [-Wunused-but-set-variable]
 7024 |   unsigned * occs, maxoccs, tmpoccs, npartial;
      |                                      ^
picosat.c:7377:24: warning: unused variable 'norig' [-Wunused-variable]
 7377 |   int i, j, ilit, len, norig = ps->alshead - ps->als, nwork, * work, res;
      |                        ^~~~~
picosat.c:7991:12: warning: variable 'redlits' set but not used [-Wunused-but-set-variable]
 7991 |   unsigned redlits;
      |            ^
picosat.c:8175:12: warning: variable 'n' set but not used [-Wunused-but-set-variable]
 8175 |   unsigned n;
      |            ^
picosat.c:6967:21: warning: unused function 'enumstr' [-Wunused-function]
 6967 | static const char * enumstr (int i) {
      |                     ^~~~~~~
11 warnings generated.
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c probabilistic_boolean_network.c -o probabilistic_boolean_network.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c reconstruct_network.c -o reconstruct_network.o
reconstruct_network.c:1074:4: warning: misleading indentation; statement is not part of the previous 'else' [-Wmisleading-indentation]
 1074 |                         SETCADR(entrySXP,funcSXP);
      |                         ^
reconstruct_network.c:1069:6: note: previous statement is here
 1069 |           else
      |           ^
1 warning generated.
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c sat_search.c -o sat_search.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c statespace_search.c -o statespace_search.o
statespace_search.c:1243:16: warning: variable 't' set but not used [-Wunused-but-set-variable]
 1243 |                 unsigned int t = 0;
      |                              ^
1 warning generated.
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c symbolic_network.c -o symbolic_network.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c symbolic_simulator.c -o symbolic_simulator.o
clang-19 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o BoolNet.so attractor_info.o attractor_search_interface.o common.o init.o picosat.o probabilistic_boolean_network.o reconstruct_network.o sat_search.o statespace_search.o symbolic_network.o symbolic_simulator.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp54j0wk/R.INSTALL3b3d511eb85394/BoolNet/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp54j0wk/R.INSTALL3b3d511eb85394/BoolNet/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp54j0wk/R.INSTALL3b3d511eb85394/BoolNet/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-BoolNet/00new/BoolNet/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BoolNet)