Undeclared package ‘DAAG’ in Rd xrefs
Package suggested but not available for checking: ‘glmmTMB’
Running examples in ‘qra-Ex.R’ failed
The error most likely occurred in:

> ### Name: extractLT
> ### Title: Obtain complete set of LT or LD estimates
> ### Aliases: extractLT extractLTpwr
> 
> ### ** Examples
> 
> form <- cbind(dead,total-dead)~0+Cultivar/dose+(1|cultRep)
> codling1989.TMB <- glmmTMB::glmmTMB(formula=form,
+   family=glmmTMB::betabinomial(link='cloglog'),
+   dispformula=~0+Cultivar/splines::ns(dose,2),
+   data=subset(codling1989,dose>0))
Error in loadNamespace(x) : there is no package called ‘glmmTMB’
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Error(s) in re-building vignettes:
  ...
--- re-building ‘MeBrPlot.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Quitting from lines 13-16 (MeBrPlot.Rmd) 
Error: processing vignette 'MeBrPlot.Rmd' failed with diagnostics:
there is no package called 'glmmTMB'
--- failed re-building ‘MeBrPlot.Rmd’

--- re-building ‘countDists.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
The magick package is required to crop "figure/plot-gph12-1.png" but not available.
The magick package is required to crop "figure/cfDBI-BB-1.png" but not available.
The magick package is required to crop "figure/plot-binAB-1.png" but not available.
The magick package is required to crop "figure/cfsim-1.png" but not available.
The magick package is required to crop "figure/cfq2-1.png" but not available.
The magick package is required to crop "figure/rqmales-1.png" but not available.
The magick package is required to crop "figure/plot-poisAB-1.png" but not available.
The magick package is required to crop "figure/wormpois-1.png" but not available.
--- finished re-building ‘countDists.Rmd’

--- re-building ‘timeMortality.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Quitting from lines 237-251 (timeMortality.Rmd) 
Error: processing vignette 'timeMortality.Rmd' failed with diagnostics:
there is no package called 'glmmTMB'
--- failed re-building ‘timeMortality.Rmd’

SUMMARY: processing the following files failed:
  ‘MeBrPlot.Rmd’ ‘timeMortality.Rmd’

Error: Vignette re-building failed.
Execution halted