Running examples in 'GPrank-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: apply_gpTest
> ### Title: Performing Gaussian process test
> ### Aliases: apply_gpTest
> ### Keywords: Bayes factor model,
> 
> ### ** Examples
> 
> x=as.matrix(seq(1,10))
> y=as.matrix(sin(x))
> v=as.matrix(runif(10,0,0.5))
> nullModelKernelTypes=c("white","fixedvariance")
> modelKernelTypes=c("rbf","white","fixedvariance")
> test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
Error in if (class(invCh) == "try-error") { : 
  the condition has length > 1
Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
Execution halted
Error(s) in re-building vignettes:
  ...
--- re-building 'GPrank.Rmd' using rmarkdown
Quitting from lines 96-101 (GPrank.Rmd) 
Error: processing vignette 'GPrank.Rmd' failed with diagnostics:
the condition has length > 1
--- failed re-building 'GPrank.Rmd'

SUMMARY: processing the following file failed:
  'GPrank.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in ‘GPrank-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: apply_gpTest
> ### Title: Performing Gaussian process test
> ### Aliases: apply_gpTest
> ### Keywords: Bayes factor model,
> 
> ### ** Examples
> 
> x=as.matrix(seq(1,10))
> y=as.matrix(sin(x))
> v=as.matrix(runif(10,0,0.5))
> nullModelKernelTypes=c("white","fixedvariance")
> modelKernelTypes=c("rbf","white","fixedvariance")
> test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
Error in if (class(invCh) == "try-error") { : 
  the condition has length > 1
Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
Execution halted
Error(s) in re-building vignettes:
  ...
--- re-building ‘GPrank.Rmd’ using rmarkdown
Quitting from lines 96-101 (GPrank.Rmd) 
Error: processing vignette ‘GPrank.Rmd’ failed with diagnostics:
the condition has length > 1
--- failed re-building ‘GPrank.Rmd’

SUMMARY: processing the following file failed:
  ‘GPrank.Rmd’

Error: Vignette re-building failed.
Execution halted
Running examples in ‘GPrank-Ex.R’ failed
The error most likely occurred in:

> ### Name: apply_gpTest
> ### Title: Performing Gaussian process test
> ### Aliases: apply_gpTest
> ### Keywords: Bayes factor model,
> 
> ### ** Examples
> 
> x=as.matrix(seq(1,10))
> y=as.matrix(sin(x))
> v=as.matrix(runif(10,0,0.5))
> nullModelKernelTypes=c("white","fixedvariance")
> modelKernelTypes=c("rbf","white","fixedvariance")
> test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
Error in if (class(invCh) == "try-error") { : 
  the condition has length > 1
Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
Execution halted
Error(s) in re-building vignettes:
--- re-building ‘GPrank.Rmd’ using rmarkdown
Quitting from lines 96-101 (GPrank.Rmd) 
Error: processing vignette 'GPrank.Rmd' failed with diagnostics:
the condition has length > 1
--- failed re-building ‘GPrank.Rmd’

SUMMARY: processing the following file failed:
  ‘GPrank.Rmd’

Error: Vignette re-building failed.
Execution halted
Running examples in ‘GPrank-Ex.R’ failed
The error most likely occurred in:

> ### Name: apply_gpTest
> ### Title: Performing Gaussian process test
> ### Aliases: apply_gpTest
> ### Keywords: Bayes factor model,
> 
> ### ** Examples
> 
> x=as.matrix(seq(1,10))
> y=as.matrix(sin(x))
> v=as.matrix(runif(10,0,0.5))
> nullModelKernelTypes=c("white","fixedvariance")
> modelKernelTypes=c("rbf","white","fixedvariance")
> test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
Error in if (class(invCh) == "try-error") { : 
  the condition has length > 1
Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
Execution halted
Error(s) in re-building vignettes:
--- re-building ‘GPrank.Rmd’ using rmarkdown
Quitting from lines 96-101 (GPrank.Rmd) 
Error: processing vignette 'GPrank.Rmd' failed with diagnostics:
the condition has length > 1
--- failed re-building ‘GPrank.Rmd’

SUMMARY: processing the following file failed:
  ‘GPrank.Rmd’

Error: Vignette re-building failed.
Execution halted
Running examples in 'GPrank-Ex.R' failed
The error most likely occurred in:

> ### Name: apply_gpTest
> ### Title: Performing Gaussian process test
> ### Aliases: apply_gpTest
> ### Keywords: Bayes factor model,
> 
> ### ** Examples
> 
> x=as.matrix(seq(1,10))
> y=as.matrix(sin(x))
> v=as.matrix(runif(10,0,0.5))
> nullModelKernelTypes=c("white","fixedvariance")
> modelKernelTypes=c("rbf","white","fixedvariance")
> test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
Error in if (class(invCh) == "try-error") { : 
  the condition has length > 1
Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
Execution halted
Error(s) in re-building vignettes:
--- re-building 'GPrank.Rmd' using rmarkdown
Quitting from lines 96-101 (GPrank.Rmd) 
Error: processing vignette 'GPrank.Rmd' failed with diagnostics:
the condition has length > 1
--- failed re-building 'GPrank.Rmd'

SUMMARY: processing the following file failed:
  'GPrank.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'GPrank-Ex.R' failed
The error most likely occurred in:

> ### Name: apply_gpTest
> ### Title: Performing Gaussian process test
> ### Aliases: apply_gpTest
> ### Keywords: Bayes factor model,
> 
> ### ** Examples
> 
> x=as.matrix(seq(1,10))
> y=as.matrix(sin(x))
> v=as.matrix(runif(10,0,0.5))
> nullModelKernelTypes=c("white","fixedvariance")
> modelKernelTypes=c("rbf","white","fixedvariance")
> test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
Error in if (class(invCh) == "try-error") { : 
  the condition has length > 1
Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
Execution halted
Error(s) in re-building vignettes:
--- re-building 'GPrank.Rmd' using rmarkdown
Quitting from lines 96-101 (GPrank.Rmd) 
Error: processing vignette 'GPrank.Rmd' failed with diagnostics:
the condition has length > 1
--- failed re-building 'GPrank.Rmd'

SUMMARY: processing the following file failed:
  'GPrank.Rmd'

Error: Vignette re-building failed.
Execution halted
Found the following files/directories:
  ‘geneA_GPprofile.pdf’ ‘geneA_abstr.png’ ‘geneA_gene.png’
  ‘geneA_reltr.png’ ‘geneB_abstr.png’ ‘geneB_gene.png’
  ‘geneB_reltr.png’ ‘geneC_abstr.png’ ‘geneC_gene.png’
  ‘geneC_reltr.png’ ‘testdb.sqlite’
Found the following files/directories:
  ‘geneA_GPprofile.pdf’ ‘geneA_abstr.png’ ‘geneA_gene.png’
  ‘geneA_reltr.png’ ‘geneB_abstr.png’ ‘geneB_gene.png’
  ‘geneB_reltr.png’ ‘geneC_abstr.png’ ‘geneC_gene.png’
  ‘geneC_reltr.png’ ‘testdb.sqlite’