Package suggested but not available for checking: ‘INLA’
Package suggested but not available for checking: ‘INLA’
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    extdata   3.0Mb
installed size is  7.0Mb
  sub-directories of 1Mb or more:
    extdata   2.9Mb
    libs      1.9Mb
Package suggested but not available for checking: ‘INLA’
Package suggested but not available for checking: ‘INLA’
installed size is 13.2Mb
  sub-directories of 1Mb or more:
    data      1.0Mb
    extdata   2.9Mb
    libs      8.0Mb
Running ‘testthat.R’ [324s/327s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
   3. ├─base::suppressWarnings(...) at test-simulateabn.R:799:7
   4. │ └─base::withCallingHandlers(...)
   5. └─abn::buildScoreCache(...) at test-simulateabn.R:800:9
   6.   └─abn::buildScoreCache.bayes(...)
   7.     └─... %do% ...
   8.       └─e$fun(obj, substitute(ex), parent.frame(), e$data)
   9.         └─base::library(p, character.only = TRUE)
  
  [ FAIL 30 | WARN 0 | SKIP 35 | PASS 485 ]
  Deleting unused snapshots:
  • tographviz/graph.dot
  • tographviz/graph1.dot
  • tographviz/graph_group.dot
  Error: Test failures
  Execution halted
Error(s) in re-building vignettes:
--- re-building ‘data_simulation.Rmd’ using rmarkdown
File fit_model-1.png not found in resource path
Error: processing vignette 'data_simulation.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building ‘data_simulation.Rmd’

--- re-building ‘mixed_effect_BN_model.Rmd’ using rmarkdown
--- finished re-building ‘mixed_effect_BN_model.Rmd’

--- re-building ‘model_specification.Rmd’ using rmarkdown
--- finished re-building ‘model_specification.Rmd’

--- re-building ‘multiprocessing.Rmd’ using rmarkdown
File benchmarkBoxPlot-1.png not found in resource path
Error: processing vignette 'multiprocessing.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building ‘multiprocessing.Rmd’

--- re-building ‘paper.Rmd’ using rmarkdown
--- finished re-building ‘paper.Rmd’

--- re-building ‘parameter_learning.Rmd’ using rmarkdown
File unnamed-chunk-3-1.png not found in resource path
Error: processing vignette 'parameter_learning.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building ‘parameter_learning.Rmd’

--- re-building ‘quick_start_example.Rmd’ using rmarkdown
--- finished re-building ‘quick_start_example.Rmd’

--- re-building ‘structure_learning.Rmd’ using rmarkdown
--- finished re-building ‘structure_learning.Rmd’

SUMMARY: processing the following files failed:
  ‘data_simulation.Rmd’ ‘multiprocessing.Rmd’ ‘parameter_learning.Rmd’

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: ‘INLA’
installed size is 13.8Mb
  sub-directories of 1Mb or more:
    data      1.0Mb
    extdata   2.9Mb
    libs      8.7Mb
Running ‘testthat.R’ [10m/10m]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
   3. ├─base::suppressWarnings(...) at test-simulateabn.R:799:7
   4. │ └─base::withCallingHandlers(...)
   5. └─abn::buildScoreCache(...) at test-simulateabn.R:800:9
   6.   └─abn::buildScoreCache.bayes(...)
   7.     └─... %do% ...
   8.       └─e$fun(obj, substitute(ex), parent.frame(), e$data)
   9.         └─base::library(p, character.only = TRUE)
  
  [ FAIL 30 | WARN 0 | SKIP 35 | PASS 485 ]
  Deleting unused snapshots:
  • tographviz/graph.dot
  • tographviz/graph1.dot
  • tographviz/graph_group.dot
  Error: Test failures
  Execution halted
Package suggested but not available for checking: 'INLA'
installed size is  7.1Mb
  sub-directories of 1Mb or more:
    data      1.0Mb
    extdata   2.9Mb
    libs      2.0Mb
Error(s) in re-building vignettes:
--- re-building 'data_simulation.Rmd' using rmarkdown
File fit_model-1.png not found in resource path
Error: processing vignette 'data_simulation.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'data_simulation.Rmd'

--- re-building 'mixed_effect_BN_model.Rmd' using rmarkdown
--- finished re-building 'mixed_effect_BN_model.Rmd'

--- re-building 'model_specification.Rmd' using rmarkdown
--- finished re-building 'model_specification.Rmd'

--- re-building 'multiprocessing.Rmd' using rmarkdown
File benchmarkBoxPlot-1.png not found in resource path
Error: processing vignette 'multiprocessing.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'multiprocessing.Rmd'

--- re-building 'paper.Rmd' using rmarkdown
--- finished re-building 'paper.Rmd'

--- re-building 'parameter_learning.Rmd' using rmarkdown
File unnamed-chunk-3-1.png not found in resource path
Error: processing vignette 'parameter_learning.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'parameter_learning.Rmd'

--- re-building 'quick_start_example.Rmd' using rmarkdown
--- finished re-building 'quick_start_example.Rmd'

--- re-building 'structure_learning.Rmd' using rmarkdown
--- finished re-building 'structure_learning.Rmd'

SUMMARY: processing the following files failed:
  'data_simulation.Rmd' 'multiprocessing.Rmd' 'parameter_learning.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: ‘INLA’
installed size is 13.1Mb
  sub-directories of 1Mb or more:
    data      1.0Mb
    extdata   2.9Mb
    libs      8.0Mb
Running ‘testthat.R’ [298s/298s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
   3. ├─base::suppressWarnings(...) at test-simulateabn.R:799:7
   4. │ └─base::withCallingHandlers(...)
   5. └─abn::buildScoreCache(...) at test-simulateabn.R:800:9
   6.   └─abn::buildScoreCache.bayes(...)
   7.     └─... %do% ...
   8.       └─e$fun(obj, substitute(ex), parent.frame(), e$data)
   9.         └─base::library(p, character.only = TRUE)
  
  [ FAIL 30 | WARN 0 | SKIP 35 | PASS 485 ]
  Deleting unused snapshots:
  • tographviz/graph.dot
  • tographviz/graph1.dot
  • tographviz/graph_group.dot
  Error: Test failures
  Execution halted
Error(s) in re-building vignettes:
--- re-building ‘data_simulation.Rmd’ using rmarkdown
File fit_model-1.png not found in resource path
Error: processing vignette 'data_simulation.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building ‘data_simulation.Rmd’

--- re-building ‘mixed_effect_BN_model.Rmd’ using rmarkdown
--- finished re-building ‘mixed_effect_BN_model.Rmd’

--- re-building ‘model_specification.Rmd’ using rmarkdown
--- finished re-building ‘model_specification.Rmd’

--- re-building ‘multiprocessing.Rmd’ using rmarkdown
File benchmarkBoxPlot-1.png not found in resource path
Error: processing vignette 'multiprocessing.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building ‘multiprocessing.Rmd’

--- re-building ‘paper.Rmd’ using rmarkdown
--- finished re-building ‘paper.Rmd’

--- re-building ‘parameter_learning.Rmd’ using rmarkdown
File unnamed-chunk-3-1.png not found in resource path
Error: processing vignette 'parameter_learning.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building ‘parameter_learning.Rmd’

--- re-building ‘quick_start_example.Rmd’ using rmarkdown
--- finished re-building ‘quick_start_example.Rmd’

--- re-building ‘structure_learning.Rmd’ using rmarkdown
--- finished re-building ‘structure_learning.Rmd’

SUMMARY: processing the following files failed:
  ‘data_simulation.Rmd’ ‘multiprocessing.Rmd’ ‘parameter_learning.Rmd’

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'INLA'
installed size is  7.1Mb
  sub-directories of 1Mb or more:
    data      1.0Mb
    extdata   2.9Mb
    libs      2.0Mb
Error(s) in re-building vignettes:
--- re-building 'data_simulation.Rmd' using rmarkdown
File fit_model-1.png not found in resource path
Error: processing vignette 'data_simulation.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'data_simulation.Rmd'

--- re-building 'mixed_effect_BN_model.Rmd' using rmarkdown
--- finished re-building 'mixed_effect_BN_model.Rmd'

--- re-building 'model_specification.Rmd' using rmarkdown
--- finished re-building 'model_specification.Rmd'

--- re-building 'multiprocessing.Rmd' using rmarkdown
File benchmarkBoxPlot-1.png not found in resource path
Error: processing vignette 'multiprocessing.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'multiprocessing.Rmd'

--- re-building 'paper.Rmd' using rmarkdown
--- finished re-building 'paper.Rmd'

--- re-building 'parameter_learning.Rmd' using rmarkdown
File unnamed-chunk-3-1.png not found in resource path
Error: processing vignette 'parameter_learning.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'parameter_learning.Rmd'

--- re-building 'quick_start_example.Rmd' using rmarkdown
--- finished re-building 'quick_start_example.Rmd'

--- re-building 'structure_learning.Rmd' using rmarkdown
--- finished re-building 'structure_learning.Rmd'

SUMMARY: processing the following files failed:
  'data_simulation.Rmd' 'multiprocessing.Rmd' 'parameter_learning.Rmd'

Error: Vignette re-building failed.
Execution halted