Package suggested but not available for checking: ‘scRNAseq’
Error(s) in re-building vignettes:
--- re-building ‘speakeasyr.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/ordering-1.png
288x288 pixels, 8 bits/pixel, 247 colors in palette
Input IDAT size = 3342 bytes
Input file size = 4173 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 3006
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 3006

Output IDAT size = 3006 bytes (336 bytes decrease)
Output file size = 3837 bytes (336 bytes = 8.05% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/tougher-1.png
288x288 pixels, 8 bits/pixel, 217 colors in palette
Input IDAT size = 11480 bytes
Input file size = 12233 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11023
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11023

Output IDAT size = 11023 bytes (457 bytes decrease)
Output file size = 11764 bytes (469 bytes = 3.83% decrease)


Quitting from lines 102-105 [obtaining-data] (speakeasyr.Rmd)
Error: processing vignette 'speakeasyr.Rmd' failed with diagnostics:
there is no package called 'scRNAseq'
--- failed re-building ‘speakeasyr.Rmd’

SUMMARY: processing the following file failed:
  ‘speakeasyr.Rmd’

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: ‘scRNAseq’
Error(s) in re-building vignettes:
--- re-building ‘speakeasyr.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/ordering-1.png
288x288 pixels, 8 bits/pixel, 247 colors in palette
Input IDAT size = 3339 bytes
Input file size = 4170 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 2959
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 2959

Output IDAT size = 2959 bytes (380 bytes decrease)
Output file size = 3790 bytes (380 bytes = 9.11% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-devel/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/tougher-1.png
288x288 pixels, 8 bits/pixel, 217 colors in palette
Input IDAT size = 11465 bytes
Input file size = 12218 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11025
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11025

Output IDAT size = 11025 bytes (440 bytes decrease)
Output file size = 11766 bytes (452 bytes = 3.70% decrease)


Quitting from lines 102-105 [obtaining-data] (speakeasyr.Rmd)
Error: processing vignette 'speakeasyr.Rmd' failed with diagnostics:
there is no package called 'scRNAseq'
--- failed re-building ‘speakeasyr.Rmd’

SUMMARY: processing the following file failed:
  ‘speakeasyr.Rmd’

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: ‘scRNAseq’
Errors in running code in vignettes:
when running code in ‘speakeasyr.Rmd’
  ...
> color <- rainbow(length(unique(memb)))[memb[ordering]]

> heatmap(adj, scale = "none", Rowv = NA, Colv = NA, 
+     RowSideColors = color)

> expression <- scRNAseq::FletcherOlfactoryData()

  When sourcing ‘speakeasyr.R’:
Error: there is no package called ‘scRNAseq’
Execution halted

  ‘speakeasyr.Rmd’ using ‘UTF-8’... failed
Error(s) in re-building vignettes:
  ...
--- re-building ‘speakeasyr.Rmd’ using rmarkdown

Quitting from lines 102-105 [obtaining-data] (speakeasyr.Rmd)
Error: processing vignette 'speakeasyr.Rmd' failed with diagnostics:
there is no package called 'scRNAseq'
--- failed re-building ‘speakeasyr.Rmd’

SUMMARY: processing the following file failed:
  ‘speakeasyr.Rmd’

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: ‘scRNAseq’
Errors in running code in vignettes:
when running code in ‘speakeasyr.Rmd’
  ...
> color <- rainbow(length(unique(memb)))[memb[ordering]]

> heatmap(adj, scale = "none", Rowv = NA, Colv = NA, 
+     RowSideColors = color)

> expression <- scRNAseq::FletcherOlfactoryData()

  When sourcing ‘speakeasyr.R’:
Error: there is no package called ‘scRNAseq’
Execution halted

  ‘speakeasyr.Rmd’ using ‘UTF-8’... failed
Error(s) in re-building vignettes:
  ...
--- re-building ‘speakeasyr.Rmd’ using rmarkdown

Quitting from lines 102-105 [obtaining-data] (speakeasyr.Rmd)
Error: processing vignette 'speakeasyr.Rmd' failed with diagnostics:
there is no package called 'scRNAseq'
--- failed re-building ‘speakeasyr.Rmd’

SUMMARY: processing the following file failed:
  ‘speakeasyr.Rmd’

Error: Vignette re-building failed.
Execution halted