installed size is  8.3Mb
  sub-directories of 1Mb or more:
    libs   6.6Mb
Running examples in ‘bigsnpr-Ex.R’ failed
The error most likely occurred in:

> ### Name: snp_fastImputeSimple
> ### Title: Fast imputation
> ### Aliases: snp_fastImputeSimple
> 
> ### ** Examples
> 
> bigsnp <- snp_attachExtdata("example-missing.bed")
> G <- bigsnp$genotypes
> G[, 2]  # some missing values
  [1] NA NA  0  0  0  0  0  0  0  0  0  0  0  0  0  1  0  0  0  0  0  1  0  1  0
 [26]  0  0  0  0  1  0  1  0  0  0  0  1  0  1  0  0  0  0  0  0  0  0  0  1  0
 [51]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
 [76]  0  0  0  0  0  0  1  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0 NA
[101]  0  1  0  0  0  0  0  0  1  0  0  0  0  0  0  0  0  0  0 NA  0  0  0  0  0
[126]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  1  0  0  0  0  0 NA  0
[151]  1  0  0  0  0  0  0  0  0  0  0 NA  0  0  0  0  0  0  0  0  0  0  1  0  0
[176]  0  0  0  0  0  0 NA  0  0  0  0  0  0  0  0  0  0  0  0  1  0  0  1  0  0
> G2 <- snp_fastImputeSimple(G)

 *** caught segfault ***
address f81bc000, cause 'invalid permissions'

Traceback:
 1: impute(Gna, method, ncores)
 2: snp_fastImputeSimple(G)
An irrecoverable exception occurred. R is aborting now ...
installed size is  7.2Mb
  sub-directories of 1Mb or more:
    libs   5.5Mb

Error(s) in re-building vignettes:
  ...
--- re-building ‘cansim.Rmd’ using rmarkdown
Quitting from lines 42-44 (cansim.Rmd) 
Error: processing vignette 'cansim.Rmd' failed with diagnostics:
Problem downloading data, multiple timeouts.
Please check your network connection. If your connections is fine then StatCan servers might be down.
--- failed re-building ‘cansim.Rmd’

--- re-building ‘working_with_large_tables.Rmd’ using rmarkdown
--- finished re-building ‘working_with_large_tables.Rmd’

SUMMARY: processing the following file failed:
  ‘cansim.Rmd’

Error: Vignette re-building failed.
Execution halted

Installation failed.
See ‘/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/RapidoPGS.Rcheck/00install.out’ for details.