|  08:45 - 09:15  | 
Welcome (Room: Red) | 
|  09:15 - 10:00  | 
Invited Lecture (Room: Red, Chair: Richard Heiberger) Frank E. Harrell Jr Information Allergy [Harrell]  | 
|  10:00 - 10:45  | 
Invited Lecture (Room: Red, Chair: William Guthrie) Mark S. Handcock Statistical Modeling of Networks in R  [Handcock] | 
|  10:45 - 11:00  | 
Coffee Break | 
|  11:00 - 12:00  | useR! Focus | 
 |  Pedagogy 1 (Room: A, Chair: Jay Emerson) Brian A. Danielak, Andrew Elby, Eric Kuo, Michael M. Hull   Using R to Assess Mathematical Sense-Making in Introductory Physics Courses   Richard M. Heiberger   An Intermediate Course in Statistical Computing   G. Jay Kerns   The IPSUR package: an Introduction to Probability and Statistics Using R     | 
 |  Biostatistics 1 (Room: B, Chair: Ying Yun Liu) Christopher Bilder, Boan Zhang, Frank Schaarschmidt, Joshua Tebbs   binGroup: A Package for Group Testing   Michael Fay   Two-sided Exact Tests and Matching Confidence Intervals for Discrete Data   Bill Pikounis, John Oleynick   The cg package for comparison of groups     | 
 |  GUIs 1 (Room: D, Chair: John Fox) Ralf Bierig, Jacek Gwizdka, Michael Cole, Nicholas Belkin   An Experiment Data Analysis Framework: Evaluating Interactive Information Behaviour with R   Dedi Rosadi   Teaching Time Series analysis course using RcmdrPlugin.Econometrics   John Verzani   The traitr package     | 
 |  Grid computing (Room: Green, Chair: Dirk Eddelbuettel) Karim Chine   User friendly distributed computing with R   Yann Richet, David Ginsbourger, Olivier Roustant, Yves Deville   A Grid Computing Environment for Design and Analysis of Computer Experiments     | 
 |  Gene expressions, genetics (Room: PR, Chair: Jing Hua Zhao) Tal Galili, Shaul Shaul, Yoav Benjamini   Analyzing the Operational RNA Code for Amino Acids - Using R   John Kloke, Joseph McKean, Patrick Kimes, Hilary Parker   Adaptive Nonparametric Statistics with Applications to Gene Expression Data     | 
 |  Computer experiments and simulation (Room: Red, Chair: Robin Hankin) Andreas Alfons, Matthias Templ, Peter Filzmoser   The R package simFrame: An object-oriented approach towards simulation studies in
statistics   Neil Diamond   Using R for the Visualisation of Computer Experiments     | 
|  12:00 - 13:00  | 
Panel Discussion (Room: Red, Chair: Lou Bajuk-Yorgan):  Challenges Bringing R into Commercial Environments   [Abstract]   | 
|  13:00 - 14:00  | 
Lunch Break  | 
|  14:00 - 15:30  |  useR! Kaleidoscope I (Room: Red, Chair: Uwe Ligges) John Fox   The RcmdrPlugin.survival Package: A Survival-Analysis GUI for R   Christian Gunning   Using Rwave to detect synchrony of influenza between U.S. states   Z.Q. John Lu, F. Potra, A. J. Wang   Fitting Multiphase Regression Models in R with Applications in Microarray Experiments   Heather Turner, David Firth   BradleyTerry2: Flexible Models for Paired Comparisons   Jing Hua Zhao   Use of R in Genetic Epidemiology Designs     | 
 |  useR! Kaleidoscope II (Room: Green, Chair: Francois Husson) Dirk Eddelbuettel, Romain Francois   Rcpp: Seamless R and C++ integration   Landon Jensen   steReoscopy   Jeffrey Ryan   Column Databases Made Easy with R   Yihui Xie   Creating Animations with R     | 
 |  useR! Kaleidoscope III (Room: PR, Chair: Joerg Polzehl) Jonathan Lees   The Haiti Earthquake: Seismological Analysis Using R   Martin Maechler, Douglas Bates   Sparse Model Matrices for (Generalized) Linear Models   Paul Rustomji, Brent Henderson, Katie Mills, Bai Qifeng   R as a statistical engine for a water quality trend analysis web -service   Daniel V. Samarov   Generalized Significance in Scale Space: The GS3 Package   Matthias Templ, Karel Hron, Peter Filzmoser   robCompositions: An R-package for robust statistical analysis of compositional data     | 
|  15:30 - 15:55  | 
Coffee Break | 
|  15:55 - 16:55  | useR! Focus | 
 |  Pedagogy 2 (Room: A, Chair: G. Jay Kerns) Ken Aho   Teaching statistics to biologists: the R-library asbio   Daniel Kaplan   Computers and the Teaching of Statistics   Thomas Roth, Joachim Herrmann   Teaching Statistics in Quality Science using the R-Package qualityTools     | 
 |  Biostatistics 2 (Room: B, Chair: Frank E. Harrell) Nelson Afanador   Using R for Data Mining in Vaccine Manufacturing: Finding Needles in Biological Haystacks   Michael Halter, Daniel R. Sisan, K.M. Mullen, Z.Q. John Lu   Statistical Analysis of Cell Population Data   Yingyun Liu   Using R for Data Simulation and Regression of Isothermal Titration Calorimetry of Proteins
with Alternative Conformations     | 
 |  GUIs 2 (Room: D, Chair: Szilard Pafka) Ian Fellows   Deducer: A Graphical useR interface for everyone   Sheri Gilley   Designing a Flexible GUI for R   Tom Taverner, Ashoka Polpitiya, Gordon A Anderson, Richard D Smith   RGtk2Extras and DanteR: rapid GUI development for an "omics" R package     | 
 |  High-performance computing (Room: Green, Chair: Stefan Theussl) Mario Inchiosa, Cezary Dendek, Przemysaw Biecek   Scalable linear algebra with the nzmatrix package   Muriel Mewissen, Thorsten Forster, Terry Sloan, Savvas Petrou   SPRINT: a Simple Parallel INTerface to High Performance Computing and a Parallel R Function
Library.   Neil Shah, Guruprasad Kora, Paul Breimyer, Yekaterina Shpanskaya   pR: Enabling Automatic Parallelization of Data-Parallel Tasks and Interfacing Parallel
Computing Libraries in R with Application to Fusion Reaction Simulations     | 
 |  Bioinformatics workflows (Room: PR, Chair: Andy Liaw) Leslie AICHAOUI-DENEVE, Vincent FROMION, Matthieu JULES, Ludovic LE CHAT   BaSyLiCA:A web interface for automatic process of Live Cell Array data using R   Michal Figurski, Leslie Shaw   Estimation of the Area-Under-the-Curve of Mycophenolic Acid using population
pharmacokinetic and multi-linear regression models simultaneously   Setia Pramana, Dan Lin, Philippe Haldermans, Ziv Shkedy   IsoGeneGUI: a graphical user interface for analyzing dose-response studies in microarray
experiments     | 
 |  Workflows (Room: Red, Chair: Richard Heiberger) Xuefei Mi, H. Friedrich Utz, Albrecht E. Melchinger   Integrated Development of the Software with Literate Programming: An Example in Plant
Breeding   Anup Parikh, Kyle Covington   Red-R: A visual programming and data analysis framework     | 
|  17:00 - 18:00  | useR! Focus | 
 |  Pedagogy 3 (Room: A, Chair: John Verzani) Arnau Mir, Margaret Miro-Julia, Monica J. Ruiz-Miro   Using R for Active Learning and Self-assesment in an e-Learning Environment   Fausto Molinari, Martina Salvadori   R-Adamant: Financial technical analysis made easy     | 
 |  Biostatistics workflows (Room: B, Chair: Marc Schwartz) Yauheniya Cherkas, Javier Cabrera, Birol Emir, Ha Nguyen   PfarMineR: An User-Friendly Expandable Front-End For Biopharmaceutical Applications with R   Sourish Saha, Vladimir Anisimov, Valerii Fedorov, Richard Heiberger   Drug Supply Modeling Software   Jeff Skinner, VIvek Gopalan, Jason Barnett, Yentram Huyen   Automating biostatistics workflows for bench scientists using R-based web-tools     | 
 |  Visualization (Room: D, Chair: Nicholas Lewin-Koh) Richard M. Heiberger, G. Jay Kerns   A Plot Method for "htest" Objects   Wesley Turner, Jeff Baumes, Phillipe Pebay, Thomas Otahal   Integration of R to VTK, Adding Statistical Computation to a Visualization Toolkit   Marie Vendettuoli, Dianne Cook, Heike Hofmann   Points, Curves and Haystacks: Datavis and Metabolomics     | 
 |  Parallel computing (Room: Green, Chair: David Smith) Przemyslaw Biecek, Pawel Chudzian, Cezary Dendek, Justin Lindsey   Massively parallel analytics for large datasets in R with nza package   Norman Matloff   Rdsm: Distributed (Quasi-)Threads Programming in R   Junji Nakano, Ei-ji Nakama   Parallel Computing with R using GridRPC     | 
 |  Longitudinal data analysis (Room: PR, Chair: Michael Messner) M. Helena Goncalves, M. Salome Cabral, Adelchi Azzalini   bild: a package for BInary Longitudinal Data   Pete Philipson, Ruwanthi Kolamunnage-Dona, Ines Sousa   Software for the joint modelling of longitudinal and survival data: the JoineR package   Yue Wang, Narinder Nangia   Bayesian Monitoring of A Longitudinal Clinical Trial Using R2WinBUGS     | 
 |  R social networks (Room: Red, Chair: Mark S. Handcock) Tal Galili   Blogging about R   Eric Sun   Criss-Crossing the Org Chart: Predicting Colleague Interactions with R   George Zhang   Social network analysis with R sna package     | 
 18:00 - 19:30  | useR!   Poster Session | 
 |  Poster session  Kuntal Bhattacharyya, Pratim Datta, David Booth   To Do or Not To Do Business with a Country: A Robust Classification Approach   Richard Bilonick   Analysis of Data from Method Comparison Studies Using R, merror, and OpenMx   Max Buot   Estimating a multivariate normal covariance matrix subject to a Loewner ordering   Jeff Cromwell   Model Maker 1: Using Model Based Ontologies for Agent Based Estimation and Learning of R Packages   Nadeem Faiz   A Simple Visualization of S and P 500 Index Performance   Tom Filloon, Dave Dunlop   How to Effectively Visualize and Quantify a 3-D Image?   Panayotis Giannakouros, Lihua Chen   Introducing computational thinking with free software in a math for liberal arts course   Ron Guida   Parallelizing a Computationally Intensive Financial R Application with Zircon Technology   Bryan Hanson   ChemoSpec: An R Package for the Chemometric Analysis of Spectroscopic Data   Ivan Kojadinovic, Jun Yan   Tests in Modeling Continuous Multivariate Distributions Using Copulas   Fayaz Kondagula, Karl Molt   Infrared Spectrometric Purity Control of Chemical Substances using R   Michael Larsen   Teaching Survey Sampling Theory using R   Autumn Laughbaum   Animated Graphics using R   Ana Carolina CN Mafra, Ricardo Cordeiro, Luciana B Nucci, Celso Stephan   Generalized additive models to nomial responses using bivariate Kernel: an solution to spatial analysis.Generalized additive models to nomial responses using bivariate Kernel: an solution to spatial analysis.   Inga Maslova   R package wfIMA: Wavelet-Functional Indexes of Magnetic Activity   Vincent Negre, Caroline Domerg, Juliette Fabre, Anne Tireau   Using R for data management in ecophysiology Information Systems   Ashoka Polpitiya, Navdeep Jaitly, Konstantinos Petritis   A Tool for Quantitative Analysis of Proteomics Data   Tom Taverner, Ashoka Polpitiya, Gordon A Anderson, Richard D Smith   RGtk2Extras and DanteR: rapid GUI development for an "omics" R package   Paul Teetor   Analytics for Trading Financial Spreads   Joan Vila, Montse Rue, Nuria Codern, Albert Sorribas   Teaching Statistics: An example of "How to'' improve the students' statistical skills using individualized assignments   David Wheeler, Kai Yu, Melissa Friesen   Are there latent decision rules in expert occupational exposure assessments?     | 
|  09:00 - 09:45  | 
Invited Lecture (Room: Red, Chair: John Lu) Luke Tierney Some possible directions for the R engine | 
|  09:45 - 10:30  | 
Invited Lecture (Room: Red, Chair: Hrishikesh Vinod) Diethelm Würtz 
The Hull, the Feasible Set, and the Risk Surface: 
A Review of the Portfolio Modeling Infrastructure in R/Rmetrics   [Würtz]
 | 
|  10:30 - 11:00  | 
Coffee Break | 
|  11:00 - 12:30  | useR! Focus | 
 |  Biostatistics 3 (Room: A, Chair: Kevin Wright) Joseph Kahn, Peter Danenberg, Sourav Das, Derek Ayers   Model simulation and decision analysis with the SimR package in R   Guido Knapp, Bimal Sinha, Dihua Xu   Extracting within-experiment precision of horticultural experiments useful for
meta-analysis   Frank Mannino, Richard Heiberger, Valerii Fedorov   Stochastic modeling and simulation in the design of multicenter clinical trials   Yue Shentu   visualization of titrated dose and recurring events using R/ggplot2     | 
 |  Business intelligence (Room: B, Chair: Michele Chambers) Ettore Colombo, Gloria Ronzoni, Matteo Fontana   R role in Business Intelligence Software Architecture   Andrew Lampitt   Placing the Power of R into Your Hands   David Reinke, Steve Miller   R and BI -- Integrating R with Open Source Business Intelligence Platforms Pentaho and
Jaspersoft   Liang Wei, Brendan Kitts   Analyzing Direct Marketing Data with R     | 
 |  Modeling (Room: D, Chair: Heather Turner) Giles Crane, Cynthia Collins, Karin Mille   Evaluating Grant Applications with Generalized Chain Block Designs in R   Guria Sibnarayan   Diagnostics in Count Data Model   Mark van der Loo   Distribution based outlier detection with the extremevalues package   Alex Zolot   Generalized Linear Mixed Model with Spatial Covariates     | 
 |  Spatio-temporal data analysis (Room: Green, Chair: Virgilio Gomez-Rubio) Thomas Achia   Generalized linear spatial modeling of HIV in Kenya   Benjamin Mazzotta   Trade Cartograms: a Graphical Method for Dyadic Datasets   Qiushan Tao   ChinaMap: Maps of China for analysing spatial data     | 
 |  Interfaces (Room: PR, Chair: Romain Francois) Karl-Dieter Crisman   Sage and R: Using R via the Sage notebook   Andrew Redd   NppToR: R Interaction for Notepad++   Andrew Runnalls   CXXR and Add-on Packages   Ansgar Steland   A high-performance compiler for a subset of R     | 
|  12:30 - 13:30  | 
Lunch Break  | 
|  13:30 - 15:00  |  useR! Kaleidoscope I (Room: Red, Chair: Douglas Bates) Dai Feng, Luke Tierney   mritc - A package for MRI tissue classification   Max Kuhn   The caret Package: A Unified Interface for Predictive Models   Joerg Polzehl, Karsten Tabelow   Statistical Issues in Accessing Brain Functionality and Anatomy   Soeren Sonnenburg, Gunnar Raetsch, Sebastian Henschel, Christian Widmer   SHOGUN - A Large Scale Machine Learning Toolbox   Stefan Theussl, Kurt Hornik, David Meyer   Many Solvers, One Interface - ROI, the R Optimization Infrastructure Package     | 
 |  useR! Kaleidoscope II (Room: Green, Chair: Jan de Leeuw) Zack Almquist   US Census Spatial and Demographic Data in R: the UScensus2000-suite of packages   Erich Neuwirth   Investigating ODEs with R and spreadsheets   Jeremy Raw   TravelR: Travel Demand Modeling in R   Ganesh Subramaniam, Ravi Varadhan, Simon Urbanek, Sam Epstein   tsX: An R package for the exploratory analysis of a large collection of time-series   Hrishikesh Vinod   Time Series Inference Applications of R in Finance and Econometrics     | 
 |  useR! Kaleidoscope III (Room: PR, Chair: Jim Porzak) Lou Bajuk-Yorgan, Stephen Kaluzny   Making R accessible to Business Analysts with TIBCO Spotfire   Alex Guazzelli, Konstantinos Stathatos, Michael Zeller   PMML Execution of R Built Predictive Solutions   Brian Hess, Michele Chambers   Analytics at Scale with R   Jim Porzak   Marketing Analytics in R   David Smith   Evolving R for Use in Commercial Environments     | 
|  15:00 - 15:25  | 
Coffee Break  | 
|  15:25 - 16:55  | useR! Focus | 
 |  fMRI (Room: Green, Chair: Brandon Whitcher) Gang Chen, Ziad Saad, Robert Cox   Statistical Analysis Programs in R for FMRI Data   Bjorn Roelstraete, Yves Rosseel   spmR: An R package For fMRI Data Analysis Based On The SPM Algorithms.   Daniela Ushizima   Front propagation using fast marching in R     | 
 |  Time series (Room: B, Chair: Diethelm Wuertz) Giuseppe Bruno   Monte Carlo Simulation for Pricing European and American Basket option   Marlene Marchena   The bullwhip effect under a generalized demand process: an R implementation   Irina Roslyakova   Modified segmentation methods of quasi-stationary time series   Robert Samohyl, Elisa Henning   Forecast Monitoring via Multivariate Statistical Process Control with R     | 
 |  RuG panel discussion (Room: Red, Chair: Derek Norton) Porzak Jim, Conway Drew, Pafka Szilard, Nash John   Panel on Starting and Building a Local R User Group     | 
 |  Social sciences (Room: D, Chair: Olivia Lau) Patrick Mair, Reinhold Hatzinger   New developments for extended Rasch modeling in R   Yves Rosseel   lavaan: an R package for structural equation modeling and more   Eric Wu, Patrick Mair, Peter Bentler   The REQS package for linking the SEM software EQS to R     | 
 |  Spreadsheets and RExcel (Room: PR, Chair: Erich Neuwirth) Adrian Dragulescu   Read, write, format Excel 2007 (xlsx) files   Keith Halbert, Richard Heiberger, Erich Neuwirth   Export pivot table to R using RExcel   Christopher Snyder, Keith Halbert   Plotting Advanced Mathematical Functions in Excel Using RExcel     | 
|  17:00 - 18:00  | useR! Focus | 
 |  Data manipulation and classification (Room: A, Chair: Julie Josse) Christopher Brown   Venn : Powerful and High-Level and Set Manipulating ... a whole new way of working with
data   Drew Conway   Real-time network analysis in R using Twitter   Pascal Neveu, Juliette Fabre   Using ontologies for R functions management     | 
 |  Optimization (Room: Green, Chair: Ravi Varadhan) Steven Ellis   An Algorithm for Unconstrained Quadratically Penalized Convex Optimization   Jo Reynaerts, Ravi Varadhan, John C. Nash   The Convergence Properties of the BLP (1995) Contraction Mapping and Alternative Algorithms
in R   Ravi Varadhan   SQUAREM: An R package for Accelerating Slowly Convergent Fixed-Point Iterations Including
the EM and MM algorithms     | 
 |  Commercial applications 2 (Room: B, Chair: Michael M. Meyer) Derek Norton   David v. Goliath: How to build an R presence in a corporate SAS environment   Richard Pugh, John James   Navigator: creating and managing complex graphics in a production environment   Doug Schmidt   Adaptive Middleware and High Performance Software For Multi-core Deployments Across Cloud Configurations     | 
 |  Lists and objects (Room: D, Chair: David Gil) Christopher Brown   Eat your hashes! Hash come to R   Romain Francois, Dirk Eddelbuettel   RProtoBuf: Protocol Buffers for R   John James   Use of and Using R as on Object Oriented Language     | 
 |  Cloud computing (Room: PR, Chair: Michael O'Connell) Karim Chine   Elastic-R, a Google docs-like portal for data analysis in the Cloud   Hsin-Ying Hsieh, Kun-Hsien Lin, Sun-Chong Wang   Cloud-R: toward a community-backed R in the cloud   Jeroen Ooms   Web development with R     | 
 |  Real-time computing (Room: Red, Chair: Jeffrey Ryan) Zubin Dowlaty, Deepak Bysani   Using R in an Event Driven Service Architecture   John Emerson, Michael Kane, Bryan Lewis   Real-time processing and analysis of data streams   Erich Neuwirth, Julia Theresa Csar   Prototyping Preventive Maintenance Tools with R     | 
|  09:00 - 09:45  | 
Invited Lecture (Room: Red, Chair: Daniel Samarov) Friedrich Leisch Reproducible Statistical Research in Practice [Leisch] | 
|  09:45 - 10:30  | 
Invited Lecture (Room: Red, Chair: Jonathon Phillips) Uwe Ligges
 
 Prospects and Challenges for CRAN - with a glance on 64-bit
Windows binaries  [Ligges]  | 
|  10:30 - 11:00  | 
Coffee Break | 
|  11:00 - 12:30  | useR! Focus | 
 |  Reproducible research and generating reports (Room: A, Chair: Martin Maechler) Carlin Brickner, Iordan Slavov, Rocco Napoli   Graphics Device Tabular Output   Abhijit Dasgupta   Flexible report generation and literate programming using R and Python's docutils module   Christophe Genolini, Bernard Desgraupes, Lionel Riou Franca   R to LaTeX / HTML   Hector Sanz, Isaac Subirana, Joan Vila   Bivariate Analyses     | 
 |  Finance and resource allocation (Room: B, Chair: Paul Gilbert) Dirk Eddelbuettel, Khanh Nguyen   RQuantLib: Bridging QuantLib and R   Gloria Ronzoni, Ettore Colombo, Matteo Fontana   R for Labour Market Policies   Jeffrey Ryan   Trading in Real Time with R and IBrokers     | 
 |  Commercial applications 1 (Room: D, Chair: Kerstin Pietzko) Brian Hess, Michele Chambers   In-database analytics with R   Mieczyslaw Klopotek, Przemyslaw Biecek, Justin Lindsey   Simple Bayesian Networks on Netezza Box   Bill Ladd   Structured Text Access and Analysis   Michael OConnell, Subra Subramanian   The use of R, S+ and Spotfire in the Oracle Life Sciences Data Hub Environment     | 
 |  Data mining, machine learning (Room: Red, Chair: Bryan Hanson) Collin Bennett, Dave Locke, Robert Grossman, Steve Vejcik   Building Segmented Models Using R and Hadoop   Shengqiao Li, Donald Adjeroh, E. James Harner   Random KNN Classification and Regression   Margaret Mio-Julia, Arnau Mir, Monica J. Ruiz-Miro   R-TREE: Implementation of Decision Trees using R     | 
 |  metRology (Room: PR, Chair: Antonio Possolo) W. F. Guthrie, H. Liu   An Excel Interface for Functions in the meRology Package   Rudiger Kessel   Automatic R-script generation for Monte Carlo Simulations   Hung-kung Liu, Steve Ellison, William Guthrie, Antonio Possolo   metRology - a new R package for statistical metrology   James Yen, Stephen Ellison   Analysis of interlaboratory studies using R and the  metRology package     | 
|  12:30 - 13:30  | 
Lunch Break  | 
|  13:30 - 13:45  | 
Closing remarks (Room: Red) | 
|  13:45 - 16:30  | 
Invited Lecture (Room: Red, Chair: Katharine Mullen) Richard Stallman Free Software in Ethics and in Practice  [Stallman]   | 
These sessions with oral presentations of 15 minutes each will give a broad overview of the many different applications and usages of the R system that should appeal to a broader audience. Each talk is directly followed by a discussion.
These sessions with oral presentations of 15 minutes each will focus on topics of special interest and their goal is to provoke fruitful discussions in the respective user communities (e.g. Robust Statistics or Econometrics etc.). In focus sessions, plenty of time for discussion is reserved at the end of the whole session (rather than after each talk) to discuss all talks of the topic together.
The poster presentation will be a chance for research described in poster format to be discussed. 
All lecture rooms are equipped with a computer or laptop and an LCD projector.
All presenters should send a PDF file with their
presentation slides to their session chairs by July 15, 2010
(unless the presenters need their own laptop for software demonstrations).